Final Paper Outline
CHAPTER 7
Botkin, D. B., & Keller, E. A. (2014). Environmental science: Earth as a living planet (9th ed.). Hoboken, NJ: John Wiley & Sons, Inc.
Chapter 7: The Biochemical Cycles
7.1 Earth, Life, and Chemistry
Earth is a Peculiar Planet
Our planet, Earth, is unique, at least to the extent that we have explored the cosmos. In our solar system and in the Milky Way galaxy, to the extent that we have observed it, Earth is the only body that has the combination of four characteristics: liquid water, water at its triple point (gas, liquid, and solid phases at the same time), plate tectonics, and life. Recent space probes to the moons of Jupiter and Saturn suggest that there may be liquid water on a few of these and perhaps also an equivalent of plate tectonics. And recent studies of Mars suggest that liquid water has broken through to the surface on occasion in the past, causing Earthlike water erosion. In August 2012 the U.S. National Aeronautics and Space Administration (NASA) successfully landed the rover Curiosity on Mars. The fo- cus of the mission is on the chemistry and geology of the planet. The rover is about the size of a small sports car (Figure 7.2). Nuclear-powered, Curiosity is a mobile science laboratory. Scientists are hopeful that chemical tests will provide clues about the possibility of past life on Mars.
The above discussion leads to consideration of the his- tory of Earth over billions of years. This study has prompt- ed some geologists to propose “big history”—to link contemporary history with geologic history, perhaps even going back all the way to the Big Bang 13.8 billion years ago, when our universe was born.2, 3 The main regimes of big history include cosmos, Earth, and life. To these in the context of environmental science, we add human history.2,
Space Travelers and Our Solar System
Life changes the cycling of chemical elements on Earth and has done so for several billions of years.4 When beginning to examine this intriguing effect of life at a global level, it is useful to imagine how travelers from another solar system might perceive our planet. Imagine these space travelers ap- proaching our solar system. They find that their fuel is lim- ited and that of the four inner planets, only two, the second (Venus) and the fourth (Mars), are on their approach path. By chance, and because of differences in the orbits of the planets, the first (Mercury) and the third (Earth) are both on the opposite side of the sun, which is not easily visible for their instruments to observe or possible for their spacecraft to approach closely. However, they can observe Mars and Venus as they fly by them, and from those observations they can hypothesize about the characteristics of the planet whose orbit is between those two—Earth (Figure 7.3).
The space travelers’ instruments tell them that the atmospheres of Venus and Mars are primarily carbon dioxide, with some ammonia (nitrogen combined with hydrogen) and trace amounts of nitrogen, oxygen, ar- gon, and the other “noble gases”—that is, elements like argon that form few compounds. Since the space travelers understand how solar systems originate, they know that the inner planets are formed by the gathering together of particles as a result of gravitational force. Therefore, they believe that the second, third, and fourth planets should have a similar composition, and this leads them to believe that it is reasonable to assume the third planet will have an atmosphere much like that of Venus and Mars.
Suppose a later space flight from the same solar system visits ours once again, but this time it is able to approach Earth. Knowing the results of the previous voyage, the new travelers are surprised to discover that Earth’s atmo- sphere is entirely different from those of Venus and Mars. It is composed primarily (78%) of free (molecular) nitro- gen (N2), with about 20% oxygen, a trace of carbon di- oxide and other gases, and some argon. What has caused this great difference? Because they are trained in science and in the study of life in the universe, and because they come from a planet that has life, these space travelers rec- ognize the cause immediately: Earth must contain life. Life changes its planet’s atmosphere, oceans, and upper sur- faces. Even without seeing life directly, they know from its atmosphere that Earth is a “living” planet.
The great 20th-century ecologist G. Evelyn Hutchin- son described this phenomenon succinctly. The strang- est characteristic of Earth’s surface, he wrote, is that it is not in thermodynamic equilibrium, which is what would happen if you were able to carry out a giant experiment in which you took Earth, with its atmosphere, oceans, and solid surfaces, and put it into a closed container sealed against the flow of energy and matter. Eventually, the chemistry of the air, water, and rocks would come into a chemical and physical fixed condition where the energy was dispersed as heat, and there would be no new chemi- cal reactions. Physicists will tell you that everything would be at the lowest energy level, that matter and energy would be dispersed randomly, and that nothing would be happening. This is called thermodynamic equilibrium. In this giant experiment, this equilibrium would resemble that in the atmospheres of Mars and Venus, and Earth’s at- mosphere would be very different from the way it is now.
Life on Earth acts as a pump to keep the atmosphere, ocean, and rocks far from a thermodynamic equilibrium. The highly oxygenated atmosphere is so far from a thermo- dynamic equilibrium that it is close to an explosive combina- tion with the organic matter on the Earth. James Lovelock, the originator of the Gaia hypothesis (see Chapter 4), has written that if the oxygen concentration in the atmosphere rose a few percentage points, to around 22% or higher, fires would break out spontaneously in dead wood on Earth’s surface.4 It’s a controversial idea, but it suggests how close the present atmosphere is to a violent disequilibrium.5
The Fitness of the Environment6
Early in the 20th century, a scientist named Lawrence Henderson wrote a book with a curious title: The Fitness of the Environment.7 In this book, Henderson observed that the environment on Earth was peculiarly suited to life. The question was, how did this come about? Henderson sought to answer this question in two ways: first, by exam- ining the cosmos and seeking an answer in the history of the universe and in fundamental characteristics of the uni- verse; second, by examining the properties of Earth and trying to understand how these may have come about.
“In the end there stands out a perfectly simple prob- lem which is undoubtedly soluble,” Henderson wrote. “In what degree are the physical, chemical, and general meteorological characteristics of water and carbon diox- ide and of the compounds of carbon, hydrogen, and oxy- gen favorable to a mechanism which must be physically, chemically, and physiologically complex, which must be itself well regulated in a well-regulated environment, and which must carry on an active exchange of matter and energy with that environment?” In other words, to what extent are the nonbiological properties of the global envi- ronment favorable to life? And why is Earth so fit for life?
Today, we can give partial answers to Henderson’s question. The answers involve recognizing that “envi- ronmental fitness” is the result of a two-way process. Life evolved in an environment conducive for that to occur, and then, over time, life altered the environment at a global level. These global alterations were originally prob- lems for existing organisms, but they also created oppor- tunities for the evolution of new life-forms adapted to the new conditions.
The Rise of Oxygen
The fossil record provides evidence that before about 2.3 billion years ago, Earth’s atmosphere was very low in oxygen (anoxic), much closer to the atmospheres of Mars and Venus. The evidence for this exists in water- worn grains of pyrite (iron sulfide, FeS2), which appear in sedimentary rocks formed more than 2.3 billion years ago. Today, when pure iron gets into streams, it is rapidly oxi- dized because there is so much oxygen in the atmosphere, and the iron forms sediments of iron oxides (what we know familiarly as rusted iron). If there were similar amounts of oxygen in the ancient waters, these ancient deposits would not have been pyrite—iron combined with sulfur—but would have been oxidized, just as they are today. This tells us that Earth’s ancient Precambrian atmosphere and oceans were low in oxygen.
The ancient oceans had a vast amount of dissolved iron, which is much more soluble in water in its unoxi- dized state. Oxygen released into the oceans combined with the dissolved iron, changing it from a more soluble to a less soluble form. No longer dissolved in the water, the iron settled (precipitated) to the bottom of the oceans and became part of deposits that slowly were turned into rock. Over millions of years, these deposits formed the thick bands of iron ore that are mined today all around Earth, with notable deposits found today from Minnesota to Australia. That was the major time when the great iron ore deposits, now mined, were formed. It is intriguing to realize that very ancient Earth history affects our econom- ic and environmental lives today.
The most convincing evidence of an oxygen- deficient atmosphere is found in ancient chemical sedi- ments called banded-iron formations. These sediments were laid down in the sea, a sea that must have been able to carry dissolved iron—something it can’t do now because oxygen precipitates the iron. If the ancient sea lacked free oxygen, then oxygen must also have been lacking in the atmosphere; otherwise, simple diffusion would have brought free oxygen into the ocean from the atmosphere.
How did the atmosphere become high enough in oxygen to change iron deposits from unoxidized to oxi- dized? The answer is that life changed the environment at a global level, adding free oxygen and removing carbon dioxide, first within the oceans, then in the atmosphere. This came about as a result of the evolution of photosyn- thesis. In photosynthesis, you will recall, carbon dioxide and water are combined, in the presence of light, to form sugar and free oxygen. But in early life, oxygen was a toxic waste that was eliminated from the cell and emitted into the surrounding environment. Scientists calculate that be- fore oxygen started to accumulate in the air, 25 times the present-day amount of atmospheric oxygen had been neu- tralized by reducing agents such as dissolved iron. It took about 2 billion years for the unoxidized iron in Earth’s oceans to be used up.
Life Responds to an Oxygen Environment
The oxygen-deficient phase of life’s history occurred early in Earth’s history, from 4.6 billion years ago until about 2.3 billion years ago. Some of the earliest photosynthetic organisms (3.4 billion years ago) were ancestors of bac- teria that formed mats in shallow water. Photosynthesis became well established by about 1.9 billion years ago, but until sufficient free oxygen was in the atmosphere, organisms could get their energy only by fermenta- tion, and the only kinds of organisms were bacteria and their relatives called prokaryotes. These have a simpler internal cell structure than that of the cells of our bodies and other familiar forms of life, known as eukaryotes (Figure 7.4).
Without oxygen, organisms cannot completely “burn” organic compounds. Instead, they can get some energy from what we call fermentation, whose waste products are carbon dioxide and alcohol. Alcohol is a high-energy compound that, for the cell in an oxygenless atmosphere, is a waste product that has to be gotten rid of. Fermenta- tion’s low-energy yield to the organism puts limitations on the anaerobic cell. For example:
• Anaerobic cells must be small because a large surface-to- volume ratio is required to allow rapid diffusion of food in and waste out.
• Anaerobic cells have trouble keeping themselves sup- plied with energy. They cannot afford to use energy to maintain organelles—specialized cell parts that func- tion like the organs of multicelled organisms. This means that all anaerobic bacteria were prokaryotes lack- ing specialized organelles, including a nucleus.
• Prokaryotes need free space around them; crowding interferes with the movement of nutrients and water into and out of the cell. Therefore, they live singly or strung end-to-end in chains. They cannot form three-dimensional structures. They are life restricted to a plane.
For other forms of life to evolve and persist, bacteria had to convert Earth’s atmosphere to one high in oxygen. Once the atmosphere became high in oxygen, complete respiration was possible, and organisms could have much more complex structures, with three-dimensional bodies, and could use energy more efficiently and rapidly. Thus, the presence of free oxygen, a biological product, made possible the evolution of eukaryotes, organisms with more structurally complex cells and bodies, including the familiar animals and plants. Eukaryotes can do the following:
• Use oxygen for respiration, and because oxidative respi- ration is much more efficient (providing more energy) than fermentation, eukaryotes do not require as large a surface-to-volume ratio as anaerobic cells do, so eukary- ote cells are larger.
• Maintain a nucleus and other organelles because of their superior metabolic efficiency.
• Form three-dimensional colonies of cells. Unlike pro- karyotes, aerobic eukaryotes are not inhibited by crowd- ing, so they can exist close to each other. This made possible the complex, multicellular body structures of animals, plants, and fungi.
Animals, plants, and fungi first evolved about 700 million to 500 million years ago. Inside their cells, DNA, the genetic material, is concentrated in a nucleus rather than distributed throughout the cell, and the cell contains organelles such as mitochondria which pro- cess energy. With the appearance of eukaryotes and the growth of an oxygenated atmosphere, the biosphere— our planet’s system that includes and sustains all life— started to change rapidly and to influence more processes on Earth.
In sum, life affected Earth’s surface—not just the atmosphere, but the oceans, rocks, and soils—and it still does so today. Billions of years ago, Earth presented a habitat where life could originate and flourish. Life, in turn, fundamentally changed the characteristics of the planet’s surface, providing new opportunities for life and ultimately leading to the evolution of us.
7.2 Life and global Chemical Cycles
All living things are made up of chemical elements, but of the more than 103 known chemical elements, only 24 are required by organisms (see the Periodic Table of Elements, Figure 7.5). These 24 are divided into the macronutrients, elements required in large amounts by all life, and micronutrients, elements required either in small amounts by all life, or in moderate amounts by some forms of life, and not at all by others.
The macronutrients, in turn, include the “big six” el- ements that are the fundamental building blocks of life: carbon, hydrogen, nitrogen, oxygen, phosphorus, and sulfur. Each one plays a special role in organisms. Carbon is the basic building block of organic compounds; along with oxygen and hydrogen, carbon forms carbohydrates. Nitrogen, along with these other three, makes proteins. Phosphorus is required in large quantities by all forms of life and is often a limiting factor for plant and algae growth. We call phosphorus the energy element because it is fundamental to a cell’s use of energy. Phosphorus is in DNA, which carries the genetic material of life and is an important ingredient in cell membranes. Phosphorus occurs in compounds called ATP and ADP, which are important in the transfer and use of energy within cells.
Other macronutrients also play specific roles. Calcium, for example, is the structure element, occurring in bones and teeth of vertebrates, shells of shellfish, and wood-forming cell walls of vegetation. Sodium and potassium are important to nerve-signal transmission. Many of the metals required by living things are necessary for specific enzymes. (An enzyme is a complex organic compound that acts as a catalyst—it causes or speeds up chemical reactions, such as digestion.)
For any form of life to persist, chemical elements must be available at the right times, in the right amounts, and in the right concentrations. When this does not hap- pen, a chemical can become a limiting factor, preventing the growth of an individual, a population, or a species, or even causing its local extinction.
Chemical elements may also be toxic to some life- forms and ecosystems. Mercury, for example, is toxic, even in low concentrations. Copper and some other ele- ments are required in low concentrations for life processes but are toxic in high concentrations.
Finally, some elements are neutral for life. Either they are chemically inert, such as the noble gases (for example, argon and neon), which do not react with other elements, or they are present on Earth in very low concentrations.
7.3 general Aspects of Biogeochemical Cycles
A biogeochemical cycle is the complete path a chemical takes through the four major components, or reservoirs, of Earth’s system: atmosphere, hydrosphere (oceans, rivers, lakes, groundwaters, and glaciers), lith- osphere (rocks and soils), and biosphere (plants and animals). (Refer to A Closer Look 7.1 for a primer on environmental chemistry.) A biogeochemical cycle is chemical because it is chemicals that are cycled, bio- because the cycle involves life, and geo- because a cycle may include atmosphere, water, rocks, and soils. Al- though there are as many biogeochemical cycles as there are chemicals, certain general concepts hold true for these cycles:
• Some chemical elements, such as oxygen and nitrogen, cycle quickly and are readily regenerated for biological activity. Typically, these elements have a gas phase and are present in the atmosphere and/or easily dissolved in water and carried by the hydrologic cycle (discussed later in the chapter).
• Other chemical elements are easily tied up in relatively immobile forms and are returned slowly, by geologic processes, to where they can be reused by life. Typically, they lack a gas phase and are not found in significant concentrations in the atmosphere. They also are rela- tively insoluble in water. Phosphorus is an example.
• Most required nutrient elements have a light atomic weight. The heaviest required micronutrient is iodine, element 53.
• Since life evolved, it has greatly altered biogeochemi- cal cycles, and this alteration has changed our planet in many ways.
• The continuation of processes that control biogeochem- ical cycles is essential to the long-term maintenance of life on Earth.
Through modern technology, we have begun to transfer chemical elements among air, water, and soil, in some cases at rates comparable to natural processes. These transfers can benefit society, as when they improve crop production, but they can also pose environmental dan- gers, as illustrated by the opening case study. To live wisely with our environment, we must recognize the positive and negative consequences of altering biogeochemical cycles.
The simplest way to visualize a biogeochemical cycle is as a box-and-arrow diagram of a system (see the discussion of systems in Chapter 4), with the boxes representing places where a chemical is stored (storage compartments) and the arrows representing pathways of transfer (Figure 7.9a). In this kind of diagram, the flow is the amount moving from one compartment to another, whereas the flux is the rate of transfer—the amount per unit time—of a chemical that enters or leaves a storage compartment. The residence time is the average time that an atom is stored in a compartment. The donating compartment is a source, and the receiving compartment is a sink.
A biogeochemical cycle is generally drawn for a sin- gle chemical element, but sometimes it is drawn for a compound—for example, water (H2O). Figure 7.9b shows the basic elements of a biogeochemical cycle for water, rep- resented about as simply as it can be, as three compartments: water stored temporarily in a lake (compartment B); en- tering the lake from the atmosphere (compartment A) as precipitation; and from the land around the lake as runoff (compartment C). It leaves the lake through evaporation to the atmosphere or as runoff via a surface stream or subsur- face flows. We diagrammed the Missouri River in Chapter 4 in this way.
As an example, consider a salt lake with no trans- fer out except by evaporation. Assume that the lake contains 3,000,000 m3 (106 million ft3) of water and the evaporation is 3,000 m3/day (106,000 ft3/day). Surface runoff into the lake is also 3,000 m3/day, so the volume of water in the lake remains constant (input 5 output). We can calculate the average residence time of the water in the lake as the volume of the lake divided by the evaporation rate (rate of transfer), or 3,000,000 m3 divided by 3,000 m3/day, which is 1,000 days (or 2.7 years).
7.4 The geologic Cycle
Throughout the 4.6 billion years of Earth’s history, rocks and soils have been continuously created, maintained, changed, and destroyed by physical, chemical, and bi- ological processes. This is another illustration that the biosphere is a dynamic system, not in steady state. Col- lectively, the processes responsible for formation and change of Earth materials are referred to as the geologic cycle (Figure 7.10). The geologic cycle is best described as a group of cycles: tectonic, hydrologic, rock, and bio- geochemical. (We discuss the last cycle separately be- cause it requires lengthier examination.)
The Tectonic Cycle
The tectonic cycle involves the creation and destruction of Earth’s solid outer layer, the lithosphere. The lithosphere is about 100 km (60 mi) thick on average and is broken into several large segments called plates, which are moving relative to one another (Figure 7.11). The slow movement of these large segments of Earth’s outermost rock shell is referred to as plate tectonics. The plates “float” on denser material and move at rates of 2 to 15 cm/year (0.8 to 6.9 in./year), about as fast as your fingernails grow. The tec- tonic cycle is driven by forces originating deep within the earth. Closer to the surface, rocks are deformed by spread- ing plates, which produce ocean basins, and by collisions of plates, which produce mountain ranges and island-arc volcanoes.
Plate tectonics has important environmental effects. Moving plates change the location and size of continents, altering atmospheric and ocean circulation and thereby altering climate. Plate movement has also created ecological islands by breaking up continental areas. When this hap- pens, closely related life-forms are isolated from one an- other for millions of years, leading to the evolution of new species. Finally, boundaries between plates are geologically active areas, and most volcanic activity and earthquakes occur there. Earthquakes occur when the brittle upper lithosphere fractures along faults (fractures in rock within the Earth’s crust). Movement of several meters between plates can occur within a few seconds or minutes, in con- trast to the slow, deeper plate movement described above.
Three types of plate boundaries occur: divergent, con- vergent, and transform faults.
A divergent plate boundary occurs at a spreading ocean ridge, where plates are moving away from one another and new lithosphere is produced. This process, known as seafloor spreading, produces ocean basins.
A convergent plate boundary occurs when plates collide. When a plate composed of relatively heavy ocean- basin rocks dives (subducts) beneath the leading edge of a plate composed of lighter continental rocks, a subduc- tion zone is present. Such a convergence may produce linear coastal mountain ranges, such as the Andes in South America. When two plates that are both composed of lighter continental rocks collide, a continental moun- tain range may form, such as the Himalayas in Asia.
A transform fault boundary occurs where one plate slides past another. An example is the San Andreas Fault in California, which is the boundary between the North American and Pacific plates. The Pacific plate is moving north, relative to the North American plate, at about 5 cm/year (2 in./year). As a result, Los Angeles is moving slowly toward San Francisco, about 500 km (300 mi) north. If this continues, in about 10 million years San Francisco will be a suburb of Los Angeles.
Uplift and subsidence of rocks, along with erosion, produce Earth’s varied topography. The spectacular Grand Canyon of the Colorado River in Arizona (Figure 7.12), sculpted from mostly sedimentary rocks, is one example.
The Hydrologic Cycle
The hydrologic cycle (Figure 7.13) is the transfer of water from the oceans to the atmosphere to the land and back to the oceans. It includes evaporation of water from the oceans; precipitation on land; evaporation from land; transpiration of water by plants; and runoff from streams,rivers, and subsurface groundwater. Solar energy drives the hydrologic cycle by evaporating water from oceans,freshwater bodies, soils, and vegetation. Of the total 1.33 billion km of water on Earth, about 97% is in oceans and about 2% is in glaciers and ice caps; 0.76% is shal- low groundwater; 0.013% is in lakes and rivers; and only 0.001% is in the atmosphere. Although water on land and in the atmosphere accounts for only a small fraction of the water on Earth, this water is important in moving chemi- cals, sculpting landscape, weathering rocks, transporting sediments, and providing our water resources.
The rates of transfer of water from land to the ocean are relatively low, and the land and oceans are somewhat independent in the water cycle because most of the water that evaporates from the ocean falls back into the ocean as precipitation, and most of the water that falls as pre- cipitation on land comes from evaporation of water from land, as shown in Figure 7.13. Approximately 60% of precipitation on land evaporates each year back to the at- mosphere, while the rest, about 40%, returns to the ocean as surface and subsurface runoff. The distribution of water is far from uniform on the land, and this has many environ- mental and ecological effects, which we discuss in Chapter 8 (on biological diversity), Chapters 18 and 20 (on water and climate), and Chapter 22 (urban environments).
At the regional and local levels, the fundamental hy- drologic unit of the landscape is the drainage basin (also called a watershed or catchment). As explained in Chapter 6, a watershed is the area that contributes surface runoff to a particular stream or river. The term is used in evaluating the hydrology of an area (such as the stream flow or run- off from slopes) and in ecological research and biological conservation. Watersheds are best categorized by drainage basin area, and further by how many streams flow into the final, main channel. A first-order watershed is drained by a single small stream; a second-order watershed includes streams from first-order watersheds, and so on. Drain- age basins vary greatly in size, from less than a hectare (2.5 acres) for a first-order watershed to millions of square kilometers for major rivers like the Missouri, Amazon, and Congo. A watershed is usually named for its main stream or river, such as the Mississippi River drainage basin.
The Rock Cycle
The rock cycle consists of numerous processes that produce rocks and soils. The rock cycle depends on the tec- tonic cycle for energy and on the hydrologic cycle for wa- ter. As shown in Figure 7.14, rock is classified as igneous, sedimentary, or metamorphic. These three types of rock are involved in a worldwide recycling process. Internal heat from the tectonic cycle produces igneous rocks from molten material (magma) near the surface, such as lava from vol- canoes. When magma crystallized deep in the earth, the igneous rock granite was formed. These new rocks weather
when exposed at the surface. Water in cracks of rocks expands when it freezes, breaking the rocks apart. This physical weathering makes smaller particles of rock from bigger ones, producing sediment, such as gravel, sand, and silt. Chemical weathering occurs, too, when the weak acids in water dissolve chemicals from rocks. The sediments and dissolved chemi- cals are then transported by water, wind, or ice (glaciers).
Weathered materials that accu- mulate in depositional basins, such as the oceans, are compacted by overly- ing sediments and converted to sedi- mentary rocks. The process of creating rock by compacting and cementing particles is called lithification. Sedi- mentary rocks buried at sufficient depths (usually tens to hundreds of kilometers) are altered by heat, pressure, or chemically active fluids and transformed into metamorphic rocks. Later, plate tectonics uplift may bring these deeply buried rocks to the surface, where they, too, are subjected to weathering, producing new sedi- ment and starting the cycle again.
You can see in Figure 7.14 that life processes play an important role in the rock cycle by adding organic carbon to rocks. The addition of organic carbon produces rocks such as limestone, which is mostly calcium carbonate (the material of seashells and bones), as well as fossil fuels, such as coal.
Our discussion of geologic cycles has emphasized tec- tonic, hydrologic, and rock-forming processes. We can now begin to integrate biogeochemical processes into the picture.
7.5 Some Major global Biogeochemical Cycles
With Figure 7.14’s basic diagram in mind, we can now con- sider complete chemical cycles, though still quite simplified. Each chemical element has its own specific cycle, but all the cycles have certain features in common (Figure 7.15).
The Carbon Cycle
Carbon is the basic building block of life and the element that anchors all organic substances, from coal and oil to DNA (deoxyribonucleic acid), the compound that carries genetic information. Although of central importance to life, carbon is not one of the most abundant elements in Earth’s crust. It contributes only 0.032% of the weight of the crust, ranking far behind oxygen (45.2%), silicon (29.5%), aluminum (8.0%), iron (5.8%), calcium (5.1%), and magnesium (2.8%).8, 9
The major pathways and storage reservoirs of the carbon cycle are shown in Figure 7.16. This diagram is simplified to show the big picture of the carbon cycle. Details are much more complex.10
• Oceans and land ecosystems: In the past half- century, ocean and land ecosystems have removed about 3.1 6 0.5 GtC/yr, which is approximately 45% of the carbon emitted from burning fossil fuels during that period.
• Land-use change: Deforestation and decomposition of what is cut and left, as well as burning of forests to make room for agriculture in the tropics, are the main reasons 2.2 6 0.8 GtC/yr is added to the atmosphere. A small flux of carbon (0.2 6 0.5 GtC/yr) from hot tropical areas is pulled from the atmosphere by growing forests. In other words, when considering land-use change, de- forestation is by far the dominant process.
• Residual land sink: The observed net uptake of CO2 from the atmosphere (see Figure 7.16) by land ecosystems suggests there must be a sink for carbon in land ecosystems that has not been adequately identified.
Carbon has a gaseous phase as part of its cycle, occurring in the atmosphere as carbon dioxide (CO2) and methane (CH4), both greenhouse gases. Carbon enters the atmo- sphere through the respiration of living things, through fires that burn organic compounds, and through diffusion from the ocean. It is removed from the atmosphere by photosyn- thesis of green plants, algae, and photosynthetic bacteria, and it enters the ocean from the atmosphere by the simple diffusion of carbon dioxide. The carbon dioxide then dis- solves, some of it remaining in that state and the rest con- verting to carbonate (CO32) and bicarbonate (HCO32). Marine algae and photosynthetic bacteria obtain the carbon dioxide they use from the water in one of these three forms.
Carbon is transferred from the land to the ocean in rivers and streams as dissolved carbon, including organic compounds, and as organic particulates (fine particles of organic matter) and seashells and other forms of calcium carbonate (CaCO3). Winds, too, transport small organic particulates from the land to the ocean. Rivers and streams transfer a relatively small fraction of the total global carbon flux to the oceans. However, on the local and regional scale, input of carbon from rivers to nearshore areas, such as deltas and salt marshes, which are often highly biologi- cally productive, is important.
Carbon enters the biota—the term for all life in a region—through photosynthesis and is returned to the atmosphere or waters by respiration or by wildfire (Figure 7.17). When an organism dies, most of its organic material decomposes into inorganic compounds, includ- ing carbon dioxide. Some carbon may be buried where there is not sufficient oxygen to make this conversion pos- sible or where the temperatures are too cold for decompo- sition. In these locations, organic matter is stored. Over years, decades, and centuries, storage of carbon occurs in wetlands, including parts of floodplains, lake basins, bogs, swamps, deep-sea sediments, and near-polar regions. Over longer periods (thousands to several million years), some carbon may be buried with sediments that become sedimentary rocks. This carbon is transformed into fossil fuels. Nearly all of the carbon stored in the lithosphere exists as sedimentary rocks, mostly carbonates, such as limestone, much of which has a direct biological origin.
The cycling of carbon dioxide between land organ- isms and the atmosphere is a large flux. Approximately 15% of the total carbon in the atmosphere is taken up by photosynthesis and released by respiration on land an- nually. Thus, as noted, life has a large effect on ecological systems and the chemistry of the atmosphere and ocean.
Because carbon forms two of the most important greenhouse gases—carbon dioxide and methane—much research has been devoted to understanding the carbon cycle, which will be discussed in Chapter 20 about the atmosphere and climate change.
The Carbon–Silicate Cycle
Carbon cycles rapidly among the atmosphere, oceans, and life. However, over geologically long periods, the cycling of carbon becomes intimately involved with the cycling of silicon. The combined carbon–silicate cycle is therefore of geologic importance to the long-term stability of the biosphere over periods that exceed half a billion years.
The carbon–silicate cycle begins when carbon diox- ide in the atmosphere dissolves in the water to form weak carbonic acid (H CO ) that falls as rain (Figure 7.18). As the mildly acidic water migrates through the ground, it chemi cally weathers (dissolves) rocks and facilitates the erosion of Earth’s abundant silicate-rich rocks. Among other products, weathering and erosion release calcium ions (Ca11) and bi- carbonate ions (HCO32). These ions enter the groundwa- ter and surface waters and eventually are transported to the ocean. Calcium and bicarbonate ions make up a major por- tion of the chemical load that rivers deliver to the oceans.
Tiny floating marine organisms use the calcium and bicarbonate to construct their shells. When these organ- isms die, the shells sink to the bottom of the ocean, where they accumulate as carbonate-rich sediments. Eventually, carried by moving tectonic plates, they enter a subduction zone (where the edge of one continental plate slips under the edge of another). There they are subjected to increased heat, pressure, and partial melting. The resulting magma releases carbon dioxide, which rises in volcanoes and is released into the atmosphere. This process provides a lithosphere-to-atmosphere flux of carbon.
The long-term carbon–silicate cycle (Figure 7.18) and the short-term carbon cycle (Figure 7.16) interact to affect levels of CO2 and O2 in the atmosphere. For example, the burial of organic material in an oxygen-poor environment amounts to a net increase of photosynthesis (which pro- duces O2) over respiration (which produces CO2). Thus, if burial of organic carbon in oxygen-poor environments increases, the concentration of atmospheric oxygen will increase. Conversely, if more organic carbon escapes buri- al and is oxidized to produce CO2, then the CO2 concen- tration in the atmosphere will increase.11
The Nitrogen Cycle
Nitrogen is essential to life in proteins and DNA. As we discussed at the beginning of this chapter, free or diatonic nitrogen (N2 uncombined with any other element) makes up approximately 78% of Earth’s atmosphere. However, no organism can use molecular nitrogen directly. Some organisms, such as animals, require nitrogen in an organic compound. Others, including plants, algae, and bacteria, can take up nitrogen either as the nitrate ion (NO32) or the ammonium ion (NH41). Because nitrogen is a rela- tively unreactive element, few processes convert molecular nitrogen to one of these compounds. Lightning oxidizes nitrogen, producing nitric oxide. In nature, essentially all other conversions of molecular nitrogen to biologically useful forms are conducted by bacteria.
The nitrogen cycle is one of the most important and most complex of the global cycles (Figure 7.19). The pro- cess of converting inorganic, molecular nitrogen in the atmosphere to ammonia or nitrate is called nitrogen fixa- tion. Once in these forms, nitrogen can be used on land by plants and in the oceans by algae. Bacteria, plants, and algae then convert these inorganic nitrogen compounds into organic ones through chemical reactions, and the ni- trogen becomes available in ecological food chains. When organisms die, bacteria convert the organic compounds containing nitrogen back to ammonia, nitrate, or molec- ular nitrogen, which enters the atmosphere. The process of releasing fixed nitrogen back to molecular nitrogen is called denitrification.
Thus, all organisms depend on nitrogen-converting bacteria. Some organisms, including termites and ruminant (cud-chewing) mammals, such as cows, goats, deer, and bi- son, have evolved symbiotic relationships with these bacte- ria. For example, the roots of the pea family have nodules that provide a habitat for the bacteria. The bacteria obtain organic compounds for food from the plants, and the plants obtain usable nitrogen. Such plants can grow in otherwise nitrogen-poor environments. When these plants die, they contribute nitrogen-rich organic matter to the soil, improv- ing the soil’s fertility. Alder trees, too, have nitrogen-fixing bacteria in their roots. These trees grow along streams, and their nitrogen-rich leaves fall into the streams and increase the supply of organic nitrogen to freshwater organisms.
In terms of availability for life, nitrogen lies some- where between carbon and phosphorus. Like carbon, ni- trogen has a gaseous phase and is a major component of Earth’s atmosphere. Unlike carbon, however, it is not very reactive, and its conversion depends heavily on biological activity. Thus, the nitrogen cycle is not only essential to life but is also primarily driven by life.
In the early part of the 20th century, scientists invented industrial processes that could convert molecular nitrogen into compounds usable by plants. This greatly increased the availability of nitrogen in fertilizers. Today, industrial fixed nitrogen is about 60% of the amount fixed in the biosphere and is a major source of commercial nitrogen fertilizer.12
Although nitrogen is required for all life, and its com- pounds are used in many technological processes and in modern agriculture, nitrogen in agricultural runoff can pollute water, and many industrial combustion processes and automobiles that burn fossil fuels produce nitrogen oxides that pollute the air and play a significant role in urban smog (see Chapter 21).
The Phosphorus Cycle
Phosphorus, one of the “big six” elements required in large quantities by all forms of life, is often a limiting nu- trient for plant and algae growth. The phosphorus cycle is significantly different from the carbon and nitrogen cycles. Unlike carbon and nitrogen, phosphorus does not have a gaseous phase on Earth; it is found in the atmo- sphere only in small particles of dust (Figure 7.20). In addition, phosphorus tends to form compounds that are relatively insoluble in water, so phosphorus is not readily weathered chemically. It does occur commonly in an oxi- dized state as phosphate, which combines with calcium, potassium, magnesium, or iron to form minerals. All told, however, the rate of transfer of phosphorus in Earth’s sys- tem is slow compared with that of carbon or nitrogen.
Phosphorus enters the biota through uptake as phos- phate by plants, algae, and photosynthetic bacteria. It is recycled locally in life on land nearly 50 times before being transported by weathering and runoff. Some phosphorus is inevitably lost to ecosystems on the land. It is transported by rivers to the oceans, either in a water-soluble form or as suspended particles. When it finally reaches the ocean, it may be recycled about 800 times before entering marine sediments to become part of the rock cycle. Over tens to hundreds of millions of years, the sediment is transformed into sedimentary rocks, after which it may eventually be returned to the land by uplift, weathering, and erosion.13
Ocean-feeding birds, such as the brown pelican, provide an important pathway in returning phosphorus from the ocean to the land. These birds feed on small fish, especially anchovies, which, in turn, feed on tiny ocean plankton. Plankton thrive where nutrients, such as phosphorus, are present. Areas of rising oceanic currents known as upwellings are such places. Upwellings occur near continents where the prevailing winds blow offshore, pushing surface waters away from the land and allowing deeper waters to rise and replace them. Upwellings carry nutrients, including phosphorus, from the depths of the oceans to the surface.
The fish-eating birds nest on offshore islands, where they are protected from predators. Over time, their nesting sites become covered with their phosphorus-laden excre- ment, called guano. The birds nest by the thousands, and deposits of guano accumulate over centuries. In relatively dry climates, guano hardens into a rocklike mass that may be up to 40 m (130 ft) thick. The guano results from a combination of biological and nonbiological processes. Without the plankton, fish, and birds, the phosphorus would have remained in the ocean. Without the upwell- ings, the phosphorus would not have been available.
Guano deposits were once major sources of phospho- rus for fertilizers. In the mid-1800s, as much as 9 mil- lion metric tons per year of guano deposits were shipped to London from islands near Peru (Figure 7.21). Today, most phosphorus fertilizers come from the mining of phosphate-rich sedimentary rocks containing fossils of marine animals. The richest phosphate mine in the world is Bone Valley, 40 km east of Tampa, Florida. But 10–15 million years ago Bone Valley was the bottom of a shallow sea where marine invertebrates lived and died.14 Through tectonic processes, the valley was slowly uplifted, and in the 1880s and 1890s phosphate ore was discovered there. Today, Bone Valley provides about 20% of the world’s phosphate (Figure 7.22).
About 80% of phosphorus is produced in four countries: the United States, China, South Africa, and Morocco.15,16 The global supply of phosphorus that can be extracted economically is about 15 billion tons (15,000 million tons). Total U.S. reserves are estimated at 1.2 billion metric tons. Most of the U.S. phosphorus, about 85%, is from Florida and North Carolina; the rest is from Utah and Idaho.17 All of our industrialized agriculture—most of the food produced in the United States—depends on phosphorus for fertilizers that comes from just four states!
Phosphorus may become much more difficult to ob- tain in the next few decades. According to the U.S. Geo- logical Survey, in recent years, the price of phosphate rock has “jumped dramatically worldwide owing to increased agricultural demand and tight supplies.” The average U.S. price has more than doubled since 2007.
One fact is clear: Without phosphorus, we cannot produce food. Thus, declining phosphorus resources will harm the global food supply and affect all of the world’s economies. Extraction continues to increase as the expanding human population demands more food and as we grow more corn for biofuel. However, if the price of phosphorus rises as high-grade deposits dwindle, phosphorus from lower-grade deposits can be mined at a profit. Florida is thought to have as much as 8 billion metric tons of phosphorus that might eventually be recov- ered if the price is right.
Mining, of course, may have negative effects on the land and ecosystems. For example, in some phospho- rus mines, huge pits and waste ponds have scarred the landscape, damaging biologic and hydrologic resources. Balancing the need for phosphorus with the adverse en- vironmental impacts of mining is a major environmental issue. Following phosphate extraction, land disrupted by open-pit phosphate mining, shown in Figure 7.22, is re- claimed to pastureland, as mandated by law.
As with nitrogen, an overabundance of phosphorus causes environmental problems. In bodies of water, from ponds to lakes and the ocean, phosphorus can promote unwanted growth of photosynthetic bacteria. As the al- gae proliferate, oxygen in the water may be depleted. In oceans, dumping of organic materials high in nitrogen and phosphorus has produced several hundred “dead zones,” collectively covering about 250,000 km2. Although this is an area almost as large as Texas, it represents less than 1% of the area of the Earth’s oceans (335,258,000 km2).
What might we do to maintain our high agriculture production but reduce our need for newly mined phos- phate? Among the possibilities:
• Recycle human waste in the urban environment to reclaim phosphorus and nitrogen.
• Use wastewater as a source of fertilizer, rather than letting it end up in waterways.
• Recycle phosphorus-rich animal waste and bones for use in fertilizer.
• Further reduce soil erosion from agricultural lands so that more phosphorus is retained in the fields for crops.
• Apply fertilizer more efficiently so less is immediately lost to wind and water erosion.
• Find new phosphorus sources and more efficient and less expensive ways to mine it.
• Use phosphorus to grow food crops rather than biofuel crops.
• Encourage organic farming methods.
• Encourage cultivation of crops that use less phosphorus, such as a genetically modified rice with a root system that takes up phosphorus from the soil.18
We have focused on the biogeochemical cycles of three of the macronutrients, illustrating the major kinds of biogeochemical cycles—those with and those without an atmospheric component—but, obviously, this is just an introduction about methods that can be applied to all elements required for life and especially in agriculture.
suMMaRy
• Biogeochemical cycles are the major way that ele- ments important to Earth processes and life are moved through the atmosphere, hydrosphere, lithosphere, and biosphere.
• Biogeochemical cycles can be described as a series of reservoirs, or storage compartments, and pathways, or fluxes, between reservoirs.
• In general, some chemical elements cycle quickly and are readily regenerated for biological activity. Elements whose biogeochemical cycles include a gaseous phase in the atmosphere tend to cycle more rapidly.
• Life on Earth has greatly altered biogeochemical cycles, creating a planet with an atmosphere unlike that of any other known and especially suited to sustain life.
• Every living thing, plant or animal, requires a number of chemical elements. These chemicals must be available at the appropriate time and in the appropriate form and amount.
• Chemicals can be reused and recycled, but in any real ecosystem, some elements are lost over time and must be replenished if life in the ecosystem is to persist. Change and disturbance of natural ecosystems are the norm. A steady state, in which the net storage of chemi- cals in an ecosystem does not change with time, cannot be maintained.
• Our modern technology has begun to alter and transfer chemical elements in biogeochemical cycles at rates comparable to those of natural processes.
Some of these activities are beneficial to society, but others create problems, such as pollution by nitrogen and phosphorus
• To be better prepared to manage our environment, we must recognize both the positive and the negative con- sequences of activities that transfer chemical elements, and we must deal with them appropriately.
• Biogeochemical cycles tend to be complex, and Earth’s biota has greatly altered the cycling of chemicals through the air, water, and soil. Continuation of these processes is essential to the long-term maintenance of life on Earth.
• There are many uncertainties in measuring either the amount of a chemical in storage or the rate of transfer between reservoirs.
Text
Botkin, D. B., & Keller, E. A. (2014). Environmental science: Earth as a living planet (9th ed.). Hoboken, NJ: John Wiley & Sons, Inc.
Chapter 7: The Biochemical Cycles
